iF700 Anti-Mouse Ly-6A/E Antibody

Product Details


CloneD7
ApplicationFlow Cytometry
ReactivityMouse
FormatiF700
Target NameLy-6A/E, Sca-1
IsotypeRat IgG2a
Antibody TypeMonoclonal
Regulatory StatusRUO
FormulationPhosphate-buffered solution, pH 7.2, containing 0.09% sodium azide and 0.2% (w/v) BSA
Protein ConcentrationSupplied at a lot-specific concentration.
Storage&HandlingThe antibody solution should be stored undiluted between 2°C and 8°C, and protected from prolonged exposure to light. Do not freeze.
Recommended UsageFor flow cytometric staining, it is recommended to use 5 uL of this reagent per 0.5-1.0 million cells in a 100 µL volume. Optimal reagent performance should be determined by titration for each specific application. iF700 has an excitation max at 690 nm and an emission max at 710 nm.
Excitation LaserRed Laser (633 nm)
Research AreasHematopoietic Stem cells, Mesenchymal Stem cells, Inflammation, Angiogenesis, Cancer Immunology
See All FormatsClone D7

Background Information


Ly-6A/E, commonly known as stem cell antigen-1 (Sca-1), is a glycosylphosphatidylinositol (GPI)-anchored cell surface protein that serves as an important marker for murine hematopoietic stem cells and other progenitor populations. It belongs to the Ly-6/uPAR superfamily, which consists of small, cysteine-rich proteins involved in cell signaling, adhesion, and immune regulation. Functionally, Sca-1 contributes to stem cell maintenance, tissue regeneration, and immune responses, making it a key molecule for studying stem cell biology and immunoregulation in mice.

Structurally, Ly-6A/E is a relatively small protein of about 18-20 kDa, characterized by a conserved “three-finger” Ly-6 domain stabilized by multiple intramolecular disulfide bonds. It is tethered to the cell membrane via a GPI anchor rather than a transmembrane domain, allowing lateral mobility within the lipid bilayer and association with signaling complexes. Sca-1 lacks intrinsic signaling motifs but modulates cell function through its interactions with other membrane-associated proteins, influencing downstream signaling cascades involving Src-family kinases and MAPK pathways.

While the precise ligands of Sca-1 remain not fully defined, its activity is thought to depend on interactions with lipid raft-associated coreceptors and possibly extracellular matrix components. Sca-1 expression is dynamically regulated by cytokines and growth factors, including interferons, which enhance its expression in both stem and immune cells. Sca-1 plays multiple physiological roles. In the hematopoietic system, it marks multipotent progenitors within the bone marrow and contributes to self-renewal and differentiation capacity. In non-hematopoietic tissues, such as skeletal muscle and the heart, Sca-1 marks resident stem or progenitor cells involved in tissue repair following injury. Within the immune system, it is expressed on activated T cells and influences T cell activation and cytokine production.

In disease, altered Sca-1 expression or function has been associated with impaired tissue regeneration, inflammatory conditions, and tumor progression. Sca-1-positive cells have been identified in various cancers, where they may contribute to tumor initiation, metastasis, and resistance to therapy, acting as markers of tumor-propagating cell populations.

Therapeutically, Ly-6A/E serves as a valuable marker for isolating stem and progenitor cells for transplantation and regenerative medicine. Understanding its regulatory role in stem cell signaling could improve strategies for tissue repair and immunotherapy. Additionally, Sca-1-associated pathways may offer targets for modulating cancer stem cell behavior and enhancing therapeutic response in experimental disease models.

Isotype Control


iF700 Rat IgG2a Isotype Control

Data Sheets


iF700 Anti-Mouse Ly-6A/E Antibody TDS

Related Protocols


Flow Cytometry Protocol

Frequently Asked Questions


How do I determine the optimal antibody concentration/titer for my experiment?
We recommend titrating each new antibody lot on your own cell type and instrument, since optimal concentration depends on cell density, target expression level, and cytometer sensitivity. Suggested starting dilutions or test sizes (e.g., µg or µl per 10^6 cells) are provided on the product page as a starting reference point, not a fixed requirement.

Can these antibodies be used for intracellular or intranuclear staining, or only surface staining?
Intended use (surface, intracellular, or both) is specified per product, indicated under Application. The appropriate Related Protocol is linked for each product. If you need to detect both surface and intracellular markers in the same panel, confirm each antibody's compatibility with your fixation/permeabilization protocol before combining them.

What controls should I use alongside these antibodies?
Matched isotype controls (same host species, isotype, and conjugate) are available for most clones to help distinguish specific binding from background/non-specific staining and are linked on each product page. Unstained, single-color compensation, and fluorescence-minus-one (FMO) controls are also recommended, especially for multicolor panel design.

Can I combine InnoCyto Flow Cytometry antibodies into a multicolor panel?
Yes — antibodies across our catalog are designed to be panel-compatible, and conjugate options are offered specifically to support multiplexing. When building a panel, pair bright fluorophores with low-expression targets, avoid excessive spectral overlap, and confirm compensation is set up correctly for your specific fluorochrome combination. Use our Panel Builder to simplify the process.

Have a product or application question? Consult our FAQs or contact us.